Category: Health Informatics
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Thomas Vakili – Congrats för scholarship to Universidad de Chile!
Congratulations for the Phd stipend from the PhD Visiting Program 2023 from Center for Mathematical Modeling (CMM) at the University of Chile, (Universidad de Chile) in Santiago, Chile. This will make it possible for Thomas Vakili to visit the center during three months the fall of 2023 and work with privacy preserving methods for Chilean patient records jointly…
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Master thesis presentation at SHI 2022, Tromsø
Alexander Dolk presented his and Hjalmar Davidsen master thesis in form of a scientific paper with the title Evaluation of LIME and SHAP in Explaining Automatic ICD-10 Classifications of Swedish Gastrointestinal Discharge Summaries at the 18th Scandinavian Conference on Health Informatics, SHI 2022, 22-23 Aug, 2022 i Tromsø, Norway, both supervisor Thomas Vakili and I were also…
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LREC 2022 in Marseille, France
The 13th Language Resources and Evaluation Conference (LREC 2022) was held in Marseille, France with over 1000 participants. Four of us from DSV were there to present our recent findings and learn about the state of the NLP field. Anastasios Lamproudis, Aron Henriksson, Hercules Dalianis and I (Thomas Vakili) had a total of four papers…
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Paper at ACL 2022 workshop: BioNLP
I had the pleasure of presenting a poster of a paper by Hercules Dalianis and me: Utility Preservation of Clinical Text After De-Identification. The paper investigates how automatic de-identification, a necessarily imperfect process, impacts the quality of the resulting texts. When a de-identification system incorrectly class a word as sensitive, the data will be slightly…
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LREC 2022 – Accepted papers
Hello everyone! We have two new papers accepted to the 13th Language Resources and Evaluation Conference, LREC 2022 that takes place in Marseille the upcoming June! The first paper is authored by Thomas Vakili, Aron Henriksson, Hercules Dalianis, and me and is called “Downstream Task Performance of BERT Models Pre-Trained Using Automatically De-Identified Clinical Data” with code…
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AAAI Fall Symposium and EMNLP – November 2021
Professor Hercules Dalianis and I got a paper about the privacy preserving qualities of BERT accepted to the AAAI Fall Symposium on Human Partnership with Medical Artificial Intelligence! The paper is titled Are Clinical BERT Models Privacy Preserving? The Difficulty of Extracting Patient-Condition Associations. Our results strongly suggest that BERT’s poor generative capabilities makes it…
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DSV at the First ClinCode Conference in Tromsø, Norway
Professor Hercules Dalianis, Sonja Remmer and myself represented DSV at the First ClinCode Conference. The conference gathered experts in medicine and computer science from across the Nordics and took place at the University Hospital of North Norway (UNN) in Tromsø. The conference was chaired by Hercules, who is also a guest professor at the Norwegian…
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Three papers accepted to the International Conference Recent Advances in Natural Language Processing, RANLP 2021, September 1-3, 2021, Bulgaria.
Three papers accepted to the International Conference Recent Advances in Natural Language Processing, RANLP 2021, September 1-3, 2021 in Varna, Bulgaria,from the Clinical Text Mining group at DSV: Sonja Remmer, Anastasios Lamproudis and Hercules Dalianis.Multi-label Diagnosis Classification of Swedish Discharge Summaries – ICD-10 Code Assignment Using KB-BERT. Alberto Blanco, Sonja Remmer, Alicia Pérez, Hercules Dalianis…